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Precision medicine for chronic inflammatory diseases

14. September 2021
in News, Pharmaceuticals

Paraty­phoid fever is an infec­tious dis­ease with high fever, abdom­i­nal pain and nau­sea, some­times also diar­rhea, which can be fatal if left untreat­ed. It is sim­i­lar to the bet­ter known typhoid fever, but is caused by a dif­fer­ent bac­te­r­i­al pathogen. While paraty­phoid fever has become very rare in Ger­many and Europe today, paraty­phoid epi­demics con­tin­ue to occur occa­sion­al­ly in Asia, espe­cial­ly after nat­ur­al dis­as­ters such as floods. In the Mid­dle Ages, how­ev­er, paraty­phoid caused epi­demics in Europe with high num­bers of victims.

Researchers of the Clus­ter of Excel­lence “Pre­ci­sion Med­i­cine in Chron­ic Inflam­ma­tion” (PMI) have now for the first time stud­ied human immuno­genet­ics to typhoid fever in Europe in more detail and iden­ti­fied a risk gene that makes peo­ple more sus­cep­ti­ble to paraty­phoid fever. This risk gene is still present in the Euro­pean pop­u­la­tion today and at the same time increas­es the risk for mod­ern inflam­ma­to­ry dis­eases such as mul­ti­ple scle­ro­sis or type I dia­betes. The team led by Pro­fes­sor Ben Krause-Kyo­ra, an archae­ol­o­gist and bio­chemist at the Insti­tute of Clin­i­cal Mol­e­c­u­lar Biol­o­gy (IKMB) at Kiel Chris­t­ian Albrechts Uni­ver­si­ty (CAU) and Schleswig-Hol­stein Uni­ver­si­ty Hos­pi­tal (UKSH), Kiel Cam­pus, recent­ly pub­lished its find­ings in the jour­nal Fron­tiers in Immunology.

In the ear­ly 1990s, the remains of numer­ous peo­ple who were buried there in the course of sev­er­al mass buri­als in the Mid­dle Ages were found dur­ing recon­struc­tion work at the Holy Spir­it Hos­pi­tal in Lübeck. Dis­trib­uted among var­i­ous pits of dif­fer­ent sizes, a total of more than 800 skele­tons of all gen­ders and ages were recov­ered, which could be dat­ed to the sec­ond half of the 14th cen­tu­ry. In a pre­vi­ous work, Krause-Kyora’s team iso­lat­ed and ana­lyzed so-called aDNA, or ancient DNA, from 92 skele­tons. This allowed them to iden­ti­fy the causative agent of paraty­phoid fever, Sal­mo­nel­la enter­i­ca sub­sp. enter­i­ca Paraty­phi C, in the remains, show­ing that the peo­ple in the mass grave had died in the wake of a paraty­phoid epidemic.

“Now we have also ana­lyzed the genes of these deceased peo­ple, which are impor­tant for the immune sys­tem and thus for fight­ing such pathogens, using the DNA that is still present.”

- Krause-Kyo­ra, a mem­ber of the PMI Clus­ter of Excellence

In this way, the researchers were able to iden­ti­fy a risk gene that was par­tic­u­lar­ly preva­lent in the deceased from the mass grave com­pared to the over­all pop­u­la­tion at the time. “This gene vari­ant appar­ent­ly meant that the immune sys­tems of peo­ple who had these vari­ants were not as good at fight­ing off the paraty­phoid pathogen and were there­fore more like­ly to con­tract it,” explains Mag­dale­na Haller, first author of the paper and a doc­tor­al stu­dent in the “aDNA Analy­sis” work­ing group at the IKMB. The gene vari­ant has already been described for peo­ple in Asia in con­nec­tion with paraty­phoid fever, but there have been no stud­ies for Europe so far.

The gene vari­ant HLA-DRB1*03:01 is locat­ed in the gene region that is impor­tant for a spe­cif­ic immune response against bac­te­ria and virus­es. With the help of com­put­er mod­el­ing, the team was able to find fur­ther evi­dence that peo­ple with this vari­ant are less effec­tive at ward­ing off the paraty­phoid pathogen.

“We cal­cu­lat­ed how well the struc­tures encod­ed by the gene bind to the paraty­phoid pathogen,” explains co-author Pro­fes­sor Tobias Lenz from the Uni­ver­si­ty of Ham­burg and the Max Planck Insti­tute for Evo­lu­tion­ary Biol­o­gy in Plön, also a mem­ber of the PMI Clus­ter of Excel­lence. “Thus, we were able to show that the struc­tures encod­ed by this gene vari­ant pre­sum­ably bind worse to the pathogen of paraty­phoid fever and can there­fore fight it more poor­ly than with oth­er vari­ants of this gene. This would explain why a par­tic­u­lar­ly large num­ber of peo­ple with this vari­ant have died from paraty­phoid,” Lenz added.

The gene vari­ant that makes peo­ple more sus­cep­ti­ble to paraty­phoid fever is still found in peo­ple in Europe today. Stud­ies have shown that it may also play a role in mod­ern inflam­ma­to­ry dis­eases. For exam­ple, it favors unwant­ed immune reac­tions to com­po­nents from food, i.e. food aller­gies, but also inflam­ma­to­ry dis­eases such as mul­ti­ple scle­ro­sis (MS) and type I dia­betes. At the same time, how­ev­er, this vari­ant is also asso­ci­at­ed with a cer­tain pro­tec­tion against lung dis­eases such as tuberculosis.

It is pre­cise­ly because of such con­nec­tions that Krause-Kyo­ra and his team are study­ing ancient pathogens and ancient human DNA. “Insights into the evo­lu­tion of such dis­eases and the human immune sys­tem can con­tribute to a bet­ter under­stand­ing of how mod­ern dis­eases of the immune sys­tem, such as chron­ic inflam­ma­to­ry dis­eases, devel­op,” Krause-Kyo­ra explains.

 

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